What’s the difference between the Institute for Creation Research and the Discovery Institute?

Nothing. Nothing at all.

The ICR is a young earth creationist organization; we know they’re a bunch of anti-scientific loons. The Discovery Institute claims to be pursuing an “evidence-based scientific theory about life’s origins”. So why is the DI echoing the ICR’s totally bogus claim that 30% of the Gorilla Genome Contradicts the Supposed Evolutionary Phylogeny of Humans and Apes?

The bottom line is that the gorilla genome has confirmed that there is not a consistent story of common ancestry coming from the genomes of the great apes and humans. Hundreds of millions of base pairs in the gorilla genome conflict with the supposed phylogeny of great apes and humans. They might think their explanation salvages common ancestry, but clearly the gorilla genome data badly messes up the supposedly nice, neat, tidy arguments which they use to claim humans are related to the great-apes.

That’s breathtakingly wrong. I’ve already explained that incomplete lineage sorting is an expected outcome of evolutionary theory (see also Joe Felsenstein’s complementary explanation of the same phenomenon). There is a consistent explanation; coalescence does not represent a conflict with the phylogeny; the gorilla genome data does not mess up any arguments of common descent. That the Discovery Institute will so baldly mangle the evidence and distort its conclusions shows how dishonest or incompetent the organization is.

The article is by Casey Luskin, which does tilt the interpretation in the direction of incompetence. What a clown.

The most revolting aphrodisiac ever

All right, is there nothing so disgusting that someone somewhere won’t eat it in the belief that it will make their penis hard? Nepal is suffering from goldrush-style violence over the harvesting of yarsagumba, a purported ‘natural viagra’. This is yarsagumba:

Yarsagumba is the result of a bizarre parasitic relationship between fungus and insect. Spores of the Cordyceps mushroom invade and consume the larvae of the Himalayan bat moth, which live underground at altitudes of 10,000 to 16,000 feet for as long as five years, feeding on roots before they commence their metamorphosis into moths.

After the fungal spores have killed and mummified the larvae, they send up a spindly brown stem, a tiny knob-headed mushroom – and then they are very likely to be picked.

Sound familiar? It’s Cordyceps, the parasitic fungus that alters the behavior of its insect hosts. The Nepalese are carefully gleaning high-altitude fields, looking for shriveled dead insects with fungal stalks sprouting from them, and selling them at high prices on the global market.

What was the first person to pick up one of these and chew on it thinking? “I’m desperately starving and about to die”?

Anyway, the article claims that it’s actually effective.

The fungus’s reputation is powered by the anecdotal reports of consumers as much as by ancient tradition: In other words, it appears to work. And medical research has backed up claims for its efficacy. A study at Stanford University’s medical school found an increase of 17-ketosteroids in the urine of men taking daily doses of yarsagumba, which indicates an increased production of androgen and other sex hormones in the adrenal gland and testicles.

Controlled animal tests offer credible evidence that regular yarsagumba use decreases recovery time between orgasms and increases the volume of semen production. In another blind trial on human subjects, 65 percent of Cordyceps eaters reported an enhanced sex drive.

I don’t know if I quite believe it. I looked for some of these articles, and not much turns up on PubMed. There are a few articles in places like The Journal of Alternative and Complementary Medicine (not very credible), and a few studies in tissue culture that show an effect on steroid synthesis in tumor cells. Nothing incredibly definitive, although I suppose it’s possible it has some effect…but nothing that justifies going all gangster over it.

Well, other than that gullible people will go crazy over imaginary magical herbs.

A tiny bit of knowledge is a dangerous thing

Good news! The gorilla genome sequence was published in Nature last week, and adds to our body of knowledge about primate evolution. Here’s the abstract:

Gorillas are humans’ closest living relatives after chimpanzees, and are of comparable importance for the study of human origins and evolution. Here we present the assembly and analysis of a genome sequence for the western lowland gorilla, and compare the whole genomes of all extant great ape genera. We propose a synthesis of genetic and fossil evidence consistent with placing the human–chimpanzee and human–chimpanzee–gorilla speciation events at approximately 6 and 10 million years ago. In 30% of the genome, gorilla is closer to human or chimpanzee than the latter are to each other; this is rarer around coding genes, indicating pervasive selection throughout great ape evolution, and has functional consequences in gene expression. A comparison of protein coding genes reveals approximately 500 genes showing accelerated evolution on each of the gorilla, human and chimpanzee lineages, and evidence for parallel acceleration, particularly of genes involved in hearing. We also compare the western and eastern gorilla species, estimating an average sequence divergence time 1.75 million years ago, but with evidence for more recent genetic exchange and a population bottleneck in the eastern species. The use of the genome sequence in these and future analyses will promote a deeper understanding of great ape biology and evolution.

I’ve highlighted one phrase in that abstract because, surprise surprise, creationists read the paper and that was the only thing they saw, and in either dumb incomprehension or malicious distortion, took an article titled “Insights into hominid evolution from the gorilla genome sequence” and twisted it into a bumbling mess of lies titled “Gorilla Genome Is Bad News for Evolution”. They treat a phenomenon called Incomplete Lineage Sorting (ILS) as an obstacle to evolution rather than an expected outcome.

[Read more…]

Female physiology shows subtle differences

As a man with a history of heart concerns, I know what to be aware of in me, and know what symptoms would send me off to the hospital (or to the phone — don’t exert yourself if experiencing heart attack symptoms!) But there are women I care about too, so it’s useful to know that women often experience different symptoms.

The study also found that women often fail to realize that they are having a heart attack – and so do doctors. This is because heart attack symptoms in women can be different than they are in men. The symptoms we most commonly associate with a heart attack, like pain in the left arm and tightness in the chest, don’t always occur in women. The study found that 42% of women who have heart attacks never experience the “classic heart attack symptom” of tightness or pain in the chest. Instead, they may develop pain in the back or jaw, light-headedness, nausea, vomiting and shortness of breath.

Heart attacks kill people of both sexes, but they affect female bodies differently than they affect male ones. The problem with having “male” as the default in medical research, and even in public health awareness campaigns, is that it fails to account for these differences, often with serious or even fatal consequences. The common heart attack symptoms for female bodies are ones we often associate with panic attacks or anxiety, especially when they appear in women.

Take care of yourselves!

(Also on Sb)

Victor Stenger and I are identical twins

In Orlando last week, I was on a panel to talk about what the objectives of secularism ought to be, and it was eerie: Vic Stenger and I talked about almost exactly the same things, except he came at it from a physicist’s perspective, talking about energy and nuclear power, while I came at it from a biologist’s perspective, talking about diversity and preservation of habitats…but we were both all science-driven and promoting the necessity of secular reasoning to recognize important problems and develop rational solutions.

Now Vic has put his talk on the FluffPo (unfortunate venue, but a good talk).

I’d put mine here, but I’m using it as the foundation for a talk I’ll be giving at the University of Utah on 7 April. So you’ll just have to wait.

Who are you going to believe? The geologist or the professional pageant contestant?

I’m from the Pacific Northwest, and I am horribly biased — it’s the most beautiful place on the planet. So I quite like Dana Hunter’s tour of the geology of a subduction zone. It’s a perspective with which I’m unfamiliar, focused as I usually am on complex shorelines and soothing rain showers and slugs and salmon.

And then I learn that the recently crowned Miss Seattle, a carpetbagger from Arizona, hates the place.

Ew, I’m seriously hating seattle right now Take me back to az! Ugh can’t stand cold rainy Seattle and the annoying people.

I say run her out of town on a rail and hand the tiara over to Dana.