Welcome to real skepticism

Some anonymous guy wrote a popular blog post in which they proposed a radical new idea that the real mechanism of SARS-CoV-2 action was that the virus invaded red blood cells, displaced iron from the heme group in hemoglobin, and thereby both reduced the O2 carrying capacity of blood cells, and released large amounts of toxic iron. They had no expertise in medicine, molecular biology, or epidemiology, and their hypothesis was total bollocking nonsense. The post has since been taken down.

Now there is a thorough post up that utterly demolishes the original claim. I’m not a fan of the hyperbole of saying someone was “destroyed” by a blog post, but in this case, the word applies. The author is an MD/PhD with a specialization in the molecular biology of mammalian heme globins, and he tears into the claims at every level and burns them to the ground. It’s wonderfully entertaining, if you enjoy good science and despise quacks.

His conclusion also brings up a very good question: why do people promote pseudoscience?

The above discussion is by no means an exhaustive list of the blog post’s incorrect statements or conclusions. Nonetheless, I hope it has been sufficient to make clear that the blog post, and even the scientific article that likely inspired it, should not be viewed as a source of any meaningful insight into SARS-CoV-2, how it affects patients, or how the virus might be treated. What I still don’t know is why the blog post author, under a pseudonym, chose to present such an incorrect description of this disease and the underlying pathophysiology with such confidence. That they would go so far as to suggest treatments for the disease despite a lack of any medical training, and in virtually the same paragraph condemn “armchair pseudo-physicians” who push incorrect information, is truly mind-boggling. Tragically, whether it arises from genuine malice, unfounded arrogance, or just simple ignorance, this sort of misinformation about a deadly pandemic can genuinely put lives at risk, and it’s up to those of us who work in this field to fight back against it in whatever way we can.

I wish I understood this phenomenon myself. It comes up all the time in evolution debates — some clown makes grand, sweeping statements dismissing evolutionary biology, and when he gets quizzed on the subject, it becomes rapidly apparent that they know nothing about the subject, and their colon is packed with so much misinformation it’s backing up their throat and dribbling out their ears. Yet somehow the frauds get all the acclaim, get paid well, and bring in adoring mobs of followers who love to see the experts get dissed…oh wait. I think I might have just answered my own question. It’s all money and ego.

Note: there are also skeptics who are all about the money and ego. I’ve known a few.

Watch party on 30 April!

Mark your calendars — the makers of We Believe in Dinosaurs are hosting a watch party of their movie on 30 April. What that means is…

  • Sign up for a seat at the link. You’ll be sent a Zoom URL so you can join a group of people online.
  • Get a copy of the movie on your streaming service. It’s $3.99 on Amazon.

  • On 30 April, before 7pm, make popcorn, log in to zoom, get your movie queued up.

  • Precisely at 7, hit play, watch the movie and listen to commentary from the makers.

  • You can, I presume, use the chat feature to make text comments of your own.

If you’re wondering what the movie is about, it’s a documentary about Answers in Genesis’s Ark Encounter. He’d rather nobody saw it, so you’ll get the bonus thrill of pissing off Ken Ham.

One Theory to rule them all

I’ve been slow on the uptake on all these conspiracy theories. I was completely unaware of all the “5G causes COVID-19” goofiness until all the cell phone towers being set on fire stories hit the news, for instance. Now Orac informs me of another wacky tale. Did you know glyphosate causes COVID-19? How about glyphosate and vaping? Maybe glyphosate in biofuels? Glyphosate in automobile emissions? Glyphosate in jet fuel? Meet Stephanie Seneff.

I am a senior research scientist at MIT [in computer science]. I have devoted over 12 years to trying to understand the role of toxic chemicals in the deterioration of human health. I have been particularly focused on figuring out what has been driving the skyrocketing rates of autism in America and around the world. My research strongly suggests that glyphosate (the active ingredient in the weed killer Roundup) is a primary cause of the autism epidemic in the United States. When the COVID-19 pandemic began its march across the world, I started to consider whether glyphosate might play a role.

If there is indeed a connection between glyphosate and COVID-19, understanding why and how they’re connected could play a critical role in combating this pandemic.

The only thing missing is a claim that glyphosate in contrails causes autism and COVID-19. Maybe it’s already there if I were to dig deeper, but I’m disinclined to dig even shallowly.

Personally, my theory, which is mine and that of every moderately sensible biologist on the planet, is that COVID-19 is caused by a moderately infectious virus that has nothing to do with glyphosate or jet fuel or rivers or I-5. But that’s just me. And most educated persons.

Even better than hydroxychloroquine!

I can cure the common cold. You may not believe it, but it’s true, and I have followed an established scientific protocol, the same as this study.

Two weeks ago, French doctors published a provocative observation in a microbiology journal. In the absence of a known treatment for COVID-19, the doctors had taken to experimentation with a potent drug known as hydroxychloroquine. For decades, the drug has been used to treat malaria—which is caused by a parasite, not a virus. In six patients with COVID-19, the doctors combined hydroxychloroquine with azithromycin (known to many as “Z-Pak,” an antibiotic that kills bacteria, not viruses) and reported that after six days of this regimen, all six people tested negative for the virus.

My protocol is easy. If you come down with the sniffles and watery eyes and stuffy nose of a cold, you just let spiders run around on your face, wait a few days, and your symptoms will fade away. You may argue that my n is very small and that I lack a control, but look — I’m just following the French model.

Unfortunately, I lack the endorsement of Dr Oz (so far — I expect he’ll jump on my bandwagon any day now, it’s what he does). I also haven’t hidden away any complications.

The report was not a randomized clinical trial—one in which many people are followed to see how their health fares, not simply whether a virus is detectable. And Oz’s “100 percent” interpretation involves conspicuous omissions. According to the study itself, three other patients who received hydroxychloroquine were too sick to be tested for the virus by day six (they were intubated in the ICU). Another had a bad reaction to the drug and stopped taking it. Another was not tested because, by day six, he had died.

I rather expect that a few people might have a bad reaction to my spider protocol, too, but at least I can say that no one has died of my treatment. I wouldn’t expect them to, since spiders are far more benign than hydroxychloroquine.

Even in people without the disease, hydroxychloroquine’s potentially harmful effects range from vomiting and headaches to instances of psychosis, loss of vision, and even sudden cardiac death. The drug is to be used with caution in people with heart conditions and liver dysfunction—both of which the coronavirus can itself cause.

Who knows? Maybe my spider protocol will also cure another viral disease, COVID-19. I’ve been handling spiders for a couple of years now, and note that I don’t have the disease. It could be a preventative. Extrapolating from these observations, maybe I have a true panacea scampering over my hands and nesting in my beard. What have you got to lose? Try it.

I’m just asking for $10 million to expand my colony (we’re going to need a lot of spiders) and that we take a couple of biomedical research labs offline to dedicate themselves to carrying out clinical trials of my cure. That’s all.

Hey! I just noticed that I don’t have cancer, or psoriasis, or guinea worm, or ebola. Spiders must cure everything! I’m gonna have to ask for more money. A dedicated research building? A few hundred assistants?

What have you got to lose?

It’s the 15th Annual Paul Nelson Day celebration!

That’s right, it’s 7 April, which is Paul Nelson Day! I figure I’l have an appropriately wild and festive celebration today by sitting home alone and grading papers. I’m planning to have an orange for lunch — I hope I’m not being too exuberant.

I thought I’d look and see what Nelson is up to nowadays. He’s still writing for the Discovery Institute, he’s working on another book, On Common Descent, which I doubt that I’ll bother to read, and no, he’s never come up with an adequate justification for the concept of “ontological depth”, which he claimed to have been studying empirically.

Just yesterday, though, he posted an essay expressing his gratitude to an atheist philosophy professor, Adolf Grünbaum, in which he is thankful for the methodological rigor of his training. That’s nice. I don’t think it took, though.

He gives an example of what he considers a flawed argument by Grünbaum.

An example: one day in class, Grünbaum was arguing that religious opinions followed geography and ancestry. One was much likelier to believe in the existence of Brahma and Vishnu, for instance, if one were born on the Indian subcontinent, and raised by Hindu parents, than, say, being born in Lincoln, Nebraska — which is true.

That fact is also irrelevant, however, to the entirely separate question “Do Brahma and Vishnu exist?” Moreover, as I explained to Grünbaum, my Jewish brother-in-law Avner, a theist, was raised in Montreal by atheistic, Stalinist parents who intended that Avner should also be an atheist who adored the USSR. But he didn’t adore the USSR. And he most certainly believed in God.

The statistical religious-belief-follows-geography-and-parentage argument Grünbaum was making, however, allowed for occasional outliers such as Avner — meaning that Grünbaum’s position possessed no predictive strength. The holes in his net of social statistics let any human counterexample swim right on through. Thus, Grünbaum’s argument said nothing definitive in any particular case, and since every human being is a particular case — that’s you, me, Avner, Grünbaum (who celebrated his bar mitzvah in a conservative Cologne synagogue), Stalin (raised as a believer who sang in church choirs and was educated in a Russian Orthodox seminary in Tiflis) — the argument just wasn’t very good, by Grünbaum’s own standards. One will believe in the God of one’s hometown and parents, except when one doesn’t. And therefore we’re back to square zero. Does God exist or not? Birthplace and parentage are irrelevant.

But Grünbaum was correct! He wasn’t making a deterministic argument that everyone born in India is somehow compelled by geography to believe in Brahma — obviously absurd because there are Muslim, Christian, Buddhist, and atheist Indians — and I doubt that he was trying to directly demonstrate God’s nonexistence, if he was as brilliant as Nelson makes him out to be. It’s also clearly not an absolute, fixed rule, so that Nelson can list a few exceptions is irrelevant.

This is an argument about epistemology: how do human beings know anything about the nature of the god they worship? What Grünbaum was pointing out is that our concept of god isn’t produced by an objective analysis of observable facts about nature, but is the result of influences from culture, community, family, personal subjective experience. Contrary to the beliefs of the Discovery Institute cultists, there is no god who left a distinctive and unambiguous signature on every living thing, and the basis of their belief in an Intelligent Designer is built entirely on bias, ignorance, misinformation, and superstition. Grünbaum was asking his students to question how they know what they think they know about deities, and to recognize that it’s mostly a product of local tradition, not divine revelation or measurable data.

I can believe that Nelson’s brother-in-law Avner was raised as an atheist and later became a believer, but that fact says nothing about how he came to believe, and trotting it out as if it somehow refutes Grünbaum is the real lazy thinking here. I rather doubt that Avner was floating all of his life in a total atheist void when suddenly, in a flash of insight, the entirety of Judaism manifested itself in his mind, and he woke from his godless dream in which the faith came to him to find, to his surprise, that an entire worldwide community of Jewish folk had independently come to all the same conclusions.

Oh, well. It’s part of the tradition of Paul Nelson Day that Paul Nelson will pop his head out of his burrow and make a nonsensical declaration that he cannot possibly defend. Yay.

Dang. I just realized that I don’t have any waffles in the house for the traditional Paul Nelson Day meal, and I’m supposed to stay-in-place and shouldn’t run off to the grocery store to get some.

Michael Egnor agrees with me, I’m having a panic attack

Uh-oh. Michael Egnor is writing about me over on the Discovery Institute site. He’s commenting on that summary of the origin of SARS-CoV-2 virus I wrote the other day, which is fine. What isn’t fine is that he agrees with it.

I threw up in my mouth a little bit.

Reading further, though, he agrees with it for all the wrong reasons, so I feel a little better.

Myers, like the Nature Medicine scientists, uses the scientific inference to intelligent design to search for (and discount) human intelligent agency. Design science is at the forefront of research on the emergence of coronavirus. Based on the available evidence and using the inference to design as a scientific hypothesis, intelligent design of the COVID-19 virus seems unlikely.

That is incorrect. “Design science” is not at the forefront of the research. The authors of that paper came to their conclusion by extensive comparisons of the viral sequence with viruses in other organisms, and by a functional analysis of the structure of the receptor binding domain. Conspiracy theorists and creationists have been poisoning the global conversation with nonsense about the virus being “designed”, so they addressed and dismissed that idea. The primary interest was in the original source, and what properties of the virus make it dangerous to us.

They also pointed out two major adaptations of the virus spike protein: changes to the receptor binding to allow it to bind effectively (but not optimally) to the human ACE2 protein, and an insertion that adds a polybasic cleavage site which also allows the linkage of glycans to the protein that assist in immunoevasion. Two mutations at once! Doesn’t his pal Michael Behe have something to say about the improbability of multiple mutations?

But there is another lesson about design and evolution to be learned from scientific research on this virus. Natural selection, if understood as undirected variation and differential reproductive success, is a destructive process. Natural selection destroys biological functional complexity — it produces diseases, cancer, and pandemics. It weakens and kills. Natural selection does to living organisms what rust does to a machine. Natural selection corrodes and destroys life, and plays no role in creating it.

Not for the virus, it wasn’t a destructive process. What was undergoing natural selection here was the virus, not us, and it has acquired attributes that make it wildly successful — it is now colonizing vast fields of billions of human beings, producing uncountable numbers of progeny, infecting more people at an accelerating rate. The virus is stronger and thriving thanks to those features, and doing very well thank you very much.

Humans are now possibly undergoing a round of natural selection in response. I don’t know if there’s a pool of heritable resistance to the virus in the population, so it’s possible we’re experiencing a field of bullets scenario, where nothing heritable is being selected for, but if there is a genotype that has an advantage here, natural selection would increase their frequency over time. Natural selection could make us more resistant as a species to SARS-CoV-2, and definitely wouldn’t be a destructive process.

Also, one of the features of the virus is the addition of short sequences, so SARS-CoV-2 may have had a slight increase in complexity over its predecessors.

Egnor is basically wrong about everything. Balance is restored to the universe.

Even wealthy people can be crackpots

I saw Cody at Some More News talking about the rich people who are dealing with the pandemic in rich people ways. So Gwyneth Paltrow is buying an expensive custom face mask and jetting off to some exotic place to avoid the problems (she thinks). Grifters are setting up luxurious get-aways for the wealthy to get away…in groups. It’s all very Masque of the Red Death, and one can only hope it ends in the same way for them.

And then there’s Eric Weinstein. Sheesh. He’s supposed to be a smart guy? He does this rambling monolog about “Covid, new physics, and our need to get off the planet” and you just have to laugh. What a buffoon…except of course that he has a lot of money and is beloved by the Intellectual Dork Web.

To paraphrase his message, in case you don’t want to sit through that mess: humanity has been very lucky so far, but the lucky streak has ended and COVID-19 has put the world’s economic systems at risk. We should be asking why we’re so ill-prepared, why we have so few ventilators and hospital beds.

This is an insane risk to be taking with the world’s economy. People are accused of being racist if they call it the Wuhan virus and talk about travel bans.

“What should we do if the economy collapses?” he asks. He’s very concerned about The Economy.

This is where it all goes off the rails. To continue to paraphrase: He insists that we’ve got to get off of this planet. He admits that people called him crazy on the Joe Rogan and Ben Shapiro shows when he said that. This virus should have been grown in a lab and escaped. We’re not going to be wise enough to rethink. Are we going to have to reboot from tardigrades?

No, really, he said that. I guess he thinks “we”, whatever he means by that, might die off, and “we” will have to restart as tardigrades. I have no idea what he’s talking about.

Then he dismisses Elon’s idea of going to Mars, because it’s too marginal. The moon is too bleak for a colony. The only place with abundant opportunity is the far cosmos.

Wait, what? He doesn’t think there’s any place in the solar system to go (I agree), but he thinks we’ve desperately got to get off the planet (I disagree. He’s nuts). So we’re going to have to take off and travel to other star systems. Again, he uses “we” a lot. Who is “we”? Is he going to bring 8 billion people along with him in his space ship?

So, he points out, we’re trapped by Einsteinian physics, so he casually suggests we just have to invent a new physics. Just like that. Oh, Elon Musk going to Mars is crazy, but coming up with a new physics that lets Eric Weinstein do what he wants, that’s sensible.

That gets us about 8 minutes into him talking at his phone, less than halfway through, and you might expect that the rest would be talking about his New Physics, but no. He asks if he has enough of an audience to talk about his new ideas, and the rest of it is him mumbling at people in the chat and rambling on about how scientists and academia are close-minded and wrong, and how he wasn’t even allowed to attend his own thesis defense. Well, if this is how he defends his ideas, I sympathize with his committee.

It’s both infuriating and entertaining — this bozo is one of the leading lights of the IDW? Wikipedia puts his claims of a “new physics” in an enlightening context.

In May 2013, Weinstein gave a colloquium, Geometric Unity, promoted by Marcus du Sautoy as a potential unified theory of physics. His equation-less unpublished theory includes an “observerse,” a 14-dimensional space, and predictions for undiscovered particles which he stated could account for dark matter. Joseph Conlon of the University of Oxford stated that some of these particles, if they existed, would already have been detected in existing accelerators such as the Large Hadron Collider.

Few physicists attended and no preprint, paper, or equations were published. Weinstein’s ideas were not widely debated. The few that did engage expressed skepticism. They were unable to debate more intensely due to the fact that there was no published paper.

Yep, total crackpot.

We are now in a race for the dumbest pandemic advice

Florida takes an early lead, with a Republican lawmaker suggesting we aim a hair dryer up our nose to treat COVID-10.

Florida Okeechobee County Commissioner Bryant Culpepper (R) referenced a program he said he saw on One American News Network on how to combat the coronavirus, the Lake Okeechobee News reports.

Said Culpepper: “One of the things that was pointed out in this interview with one of the foremost doctors who has studied the coronavirus said that the nasal passages and the nasal membranes are the coolest part of the body. That’s why the virus tends to go there until it then becomes healthy enough to go into the lungs.”

He added: “This sound really goofy, and it did to me too, but it works. Once the temperature reaches 136 degrees Fahrenheit, the virus falls apart, it disintegrates. I said how would you get the temperature up to 136 degrees? The answer was you use a blow dryer. You hold a blow dryer up to your face and you inhale through your nose and it kills all the viruses in your nose.”

Do I need to explain that that wouldn’t work at all, and would probably be deleterious to your sinuses?

By the way, One America News Network is a conspiracy-peddling, far right paranoid network that promotes nothing but pro-Trump bullshit. Don’t trust it.